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mass range and scan time, more than one microscan may be obtained during
each scan. (The number of microscans per scan for each set of mass-
range/scan-time conditions selected is displayed on the data system monitor
after these conditions are specified.) If two or more microscans are obtained,
they are averaged by the SAP Board and then stored as one mass spectrum by
the data system. This averaging of microscans provides improved spectral
quality.
At the completion of the scanning period, the rf voltage is again set to near 0V,
and the electron multiplier put into STANDBY. The entire process (setup and
scanning) is repeated up to six times per microscan, once for each of the six
segments.
Basic Equation of the AGC Software
The AGC software sets the ionization time to maintain the optimum quantity of
ions for each of the segments according to the following equation:
a
m
t
pa SFx
TIC
TIC
xITIT
where:
IT
a
is the actual ionization time to be used for segment “a” in a six segment
microscan;
IT
p
is the ionization time of the prescan (default value of 0.1 millisecond);
TIC
m
is the area in counts of the total ion AGC peak from the prescan
measurement;
TIC
t
is the tunable target TIC value used as a reference for the prescan
measurement calculations; and
SF
a
is the scale factor for segment “a”. It is a percentage of the actual ionization
time (IT
a
) that permits individual adjustment of the response and resolution of
each segment.
Increasing the target TIC increases the ionization time for all the segments;
decreasing it will decrease the ionization time. The target TIC is used as a
general resolution adjustment for the entire mass range (all six segments
together).
From the equation above, it is apparent that when the measured TIC increases
because the ion trap is generating more ions (usually due to an increase in
sample or background pressure), then the AGC software will reduce the
ionization time automatically, and vice versa. Also, if the target TIC is increased,
the ionization time for any given pressure will increase. This causes the ion trap
to create more ions. Likewise, reducing the target TIC value will decrease the
number of ions in the trap.
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